Associate Director, Manufacturing Systems & Automation (CGT)

vrtx· Vertex Pharmaceuticals Inc (US)
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📍 Boston, MAFull time💰 USD 160K–240K

About this role

Job Description

General Summary

We are seeking an experienced Associate Director, Manufacturing Systems and Automation – CGT to lead the manufacturing systems and automation team within the Biopharmaceutical Sciences – Cell & Gene Therapy (CGT) Manufacturing and Process Engineering organization. This role is critical in developing the current team to support scalable clinical and commercial manufacturing across multiple Boston-area sites. The Associate Director is responsible for leading the strategy, implementation, integration, validation, and continuous improvement of GMP manufacturing systems supporting cell and gene therapy operations. This role provides technical and operational leadership for digital manufacturing initiatives focused on manufacturing execution, automation integration, electronic batch records, and end-to-end product traceability. This position reports to the Director, CGT Engineering Operations and is designated as on-site, based at LC1, Boston.

Key Duties and Responsibilities:

  • Lead the design, implementation, integration, and lifecycle management of GMP manufacturing systems and automation platforms supporting cell and gene therapy manufacturing operations
  • Develop and execute digital manufacturing strategies enabling real-time manufacturing execution, electronic workflow orchestration, automated data collection, equipment integration, process monitoring, manufacturing analytics and reporting
  • Drive deployment and optimization of SCADA, MES, LIMS, OSI Pi, eBR, batch review by exception , release by exception, chain of custody/chain of identity, digital and smart manufacturing initiatives
  • Lead cross-functional initiatives to improve manufacturing efficiency, system reliability, and data integrity
  • Partner with enterprise IT and Quality Assurance to define exception management strategies, review workflows, and electronic approval requirements
  • Drive reduction in batch review timelines and support accelerated batch disposition through exception-based review processes
  • Lead implementation and governance of digital traceability systems supporting patient-specific autologous therapy manufacturing
  • Ensure manufacturing systems and electronic release processes aligned with FDA GMP regulations, 21 CFR Part 11, EU Annex 11, GAMP 5, ALCOA+ data integrity requirements
  • Ensure manufacturing systems maintain inspection readiness and compliance with global regulatory expectations
  • Develop SOPs, governance standards, and lifecycle management procedures for manufacturing systems and automation platforms
  • Track and manage key metrics and KPIs to drive operational efficiency and continuous improvement

Knowledge and Skills:

  • Strong ability to simplify high-level concepts into actionable insights and advise on digital maturity, digital transformation and system integrations to the site leadership team
  • Proven leadership in regulated environments with a focus on team development and operational excellence
  • Strong communication and interpersonal skills, including direct interaction with regulatory authorities related to aseptic controls and strategies
  • Analytical problem-solving and strategic planning abilities
  • Adaptability and sound decision-making in dynamic environments

Education and Experience:

  • Bachelor’s or master’s degree in engineering, Biotechnology, Automation, Computer Science, Life Sciences, or related discipline
  • 7-10 years of progressive experience in GMP manufacturing or automation leadership, with at least 5 years of commercial digital/automation leadership in CGT, Biologics, or Sterile filling operations
  • Strong implementation and commercialization experience in integrating first-of-kind equipment with manufacturing systems, automated batch review by exception, release by exception, chain-of-custody and chain-of-identification of autologous & allogeneic CGT products
  • Experience managing GMP training programs, driving continuous improvement, and implementing digital transformations
  • Proficiency in manufacturing systems (e.g., eBR, DCS/SCADA, Pi, ERP, QMS) and paperless execution strategies
  • Strong knowledge of regulatory requirements, including investigations, CAPA, change control, and risk mitigation


At Vertex, we embrace continuous learning and encourage employees to stay informed on advances in AI, technology, automation, and industry trends. We seek talent who bring an external perspective, demonstrate curiosity and sound judgment, and thoughtfully adopt new capabilities that improve decision-making, drive innovation, increase efficiency, and help deliver better outcomes for patients.

Pay Range:

$160,000 - $240,000

Disclosure Statement:

The range provided is based on what we believe is a reasonable estimate for the base salary pay range for this job at the time of posting. This role is eligible for an annual bonus and annual equity awards. Some roles may also be eligible for overtime pay, in accordance with federal and state requirements. Actual base salary pay will be based on a number of factors, including skills, competencies, experience, and other job-related factors permitted by law.

At Vertex, our Total Rewards offerings also include inclusive market-leading benefits to meet our employees wherever they are in their career, financial, family and wellbeing journey while providing flexibility and resources to support their growth and aspirations.  From medical, dental and vision benefits to generous paid time off (including a week-long company shutdown in the Summer and the Winter), educational assistance programs including student loan repayment, a generous commuting subsidy, matching charitable donations, 401(k) and so much more.

Flex Designation:

On-Site Designated

Flex Eligibility Status:

In this On-Site designated role, you will work five days per week on-site with ad hoc flexibility.  

Note: The Flex status for this position is subject to Vertex’s Policy on Flex @ Vertex Program and may be changed at any time.

#LI-Onsite

Company Information

Vertex is a global biotechnology company that invests in scientific innovation.

Vertex is committed to equal employment opportunity and non-discrimination for all employees and qualified applicants without regard to a person's race, color, sex, gender identity or expression, age, religion, national origin, ancestry, ethnicity, disability, veteran status, genetic information, sexual orientation, marital status, or any characteristic protected under applicable law. Vertex is an E-Verify Employer in the United States. Vertex will make reasonable accommodations for qualified individuals with known disabilities, in accordance with applicable law.

Any applicant requiring an accommodation in connection with the hiring process and/or to perform the essential functions of the position for which the applicant has applied should make a request to the recruiter or hiring manager, or contact Talent Acquisition at ApplicationAssistance@vrtx.com

Frequently Asked Questions

What is the salary for the Associate Director, Manufacturing Systems & Automation (CGT) role at vrtx?
The listed salary for this Associate Director, Manufacturing Systems & Automation (CGT) position at vrtx is USD 160K–240K. This is an Full time role.
Where is the Associate Director, Manufacturing Systems & Automation (CGT) position at vrtx located?
This Associate Director, Manufacturing Systems & Automation (CGT) role at vrtx is based in Boston, MA. The position is listed as on-site or hybrid. Check the full job description or apply directly to confirm the work arrangement.
Is the Associate Director, Manufacturing Systems & Automation (CGT) role at vrtx full-time or part-time?
This is listed as a Full time position. It is posted as a Associate Director, Manufacturing Systems & Automation (CGT) role in the Vertex Pharmaceuticals Inc (US) department at vrtx.
Which team or department does the Associate Director, Manufacturing Systems & Automation (CGT) at vrtx belong to?
This Associate Director, Manufacturing Systems & Automation (CGT) position is part of the Vertex Pharmaceuticals Inc (US) department at vrtx. See the full job description for more information about the team structure and responsibilities.
How do I apply for the Associate Director, Manufacturing Systems & Automation (CGT) position at vrtx?
Click the "Apply Now" button on this page. You will be redirected to vrtx's official application portal hosted on workday where you can submit your application directly.
When was the Associate Director, Manufacturing Systems & Automation (CGT) job at vrtx posted?
This Associate Director, Manufacturing Systems & Automation (CGT) position at vrtx was posted on Sep 8, 2026. Apply as soon as possible — early applications are often reviewed first.
Associate Director, Manufacturing Systems & Automation (CGT)
vrtx · 💰 USD 160K–240K
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