AI Scientist Intern, Computational Protein Design

xairatherapeutics· Computational Protein Design
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About this role

About Xaira Therapeutics

Xaira is an innovative biotech startup focused on leveraging AI to transform drug discovery and development. The company is leading the development of generative AI models to design protein and antibody therapeutics, enabling the creation of medicines against historically hard-to-drug molecular targets. It is also developing foundation models for biology and disease to enable better target elucidation and patient stratification. Collectively, these technologies aim to continually enable the identification of novel therapies and to improve success in drug development. Xaira is headquartered in the San Francisco Bay Area, Seattle, and London.

About the Role

As an AI Scientist Intern on our Computational Protein Design team, you will work alongside talented scientists and engineers developing generative AI models for protein and antibody therapeutic design. During your internship, you will contribute to advancing state-of-the-art machine learning models for biology, with a focus on impacting protein/antibody design and drug discovery. You will also have the opportunity to collaborate with interdisciplinary experts in biology, drug discovery, and clinical research.

Responsibilities

  • Develop and apply deep learning methods for protein/antibody structure, sequence, or property modeling, under the guidance and mentorship of experienced scientists and engineers
  • Implement and train models on GPUs using PyTorch
  • Contribute to ongoing research projects involving protein structure, sequence, or biophysical/affinity datasets
  • Participate in discussions to help generate innovative ideas for advancing AI methodologies in computational protein design
  • Document findings and communicate progress effectively to peers and mentors

Qualifications

  • Currently pursuing a MS or PhD in Computer Science, Machine Learning, or a related technical field, with strong publication record
  • Hands-on experience with PyTorch and training/inference of AI models on GPUs
  • Strong interest in AI innovation and its applications to interdisciplinary fields such as biology and chemistry
  • Extensive hands-on experience with deep learning methods and frameworks
  • Ability to work collaboratively in a team environment and learn from experienced mentors
  • A scientifically curious mindset with a passion for exploring new challenges
  • Experience with large-scale distributed training and inference is a plus
  • Exposure to molecular structure or biological sequence data or computational biology/bioinformatics is a plus, but not required
  • Prior research experience demonstrated through publications and/or significant open source code authorship
  • Interest in contributing to open-source deep learning libraries and frameworks is a plus

 

Internship Duration
3 months

The expected monthly compensation range is $10,000–$15,000, depending on experience and qualifications. We are open to higher compensation for candidates with exceptional experience or impact. This internship is designed to provide a unique learning experience, offering hands-on exposure to the intersection of AI and computational protein design while allowing you to contribute meaningfully to real-world projects.

Frequently Asked Questions

What is the salary for the AI Scientist Intern, Computational Protein Design role at xairatherapeutics?
The listed salary for this AI Scientist Intern, Computational Protein Design position at xairatherapeutics is USD 10K–15K. This is an full-time role.
Where is the AI Scientist Intern, Computational Protein Design position at xairatherapeutics located?
This AI Scientist Intern, Computational Protein Design role at xairatherapeutics is based in Seattle, Washington, United States; South San Francisco, California, United States. The position is listed as on-site or hybrid. Check the full job description or apply directly to confirm the work arrangement.
Which team or department does the AI Scientist Intern, Computational Protein Design at xairatherapeutics belong to?
This AI Scientist Intern, Computational Protein Design position is part of the Computational Protein Design department at xairatherapeutics. See the full job description for more information about the team structure and responsibilities.
How do I apply for the AI Scientist Intern, Computational Protein Design position at xairatherapeutics?
Click the "Apply Now" button on this page. You will be redirected to xairatherapeutics's official application portal hosted on greenhouse where you can submit your application directly.
When was the AI Scientist Intern, Computational Protein Design job at xairatherapeutics posted?
This AI Scientist Intern, Computational Protein Design position at xairatherapeutics was posted on Aug 28, 2026. Apply as soon as possible — early applications are often reviewed first.
AI Scientist Intern, Computational Protein Design
xairatherapeutics · 💰 USD 10K–15K
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