Advisor/Sr. Advisor – Process Engineer-Peptides/Small molecule Scientist

lilly· 540 Eli Lilly Services India Pvt Ltd – Hyderabad
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📍 India, HyderabadFull time

About this role

At Lilly, we unite caring with discovery to make life better for people around the world. We are a global healthcare leader headquartered in Indianapolis, Indiana. Our employees around the world work to discover and bring life-changing medicines to those who need them, improve the understanding and management of disease, and give back to our communities through philanthropy and volunteerism. We give our best effort to our work, and we put people first. We’re looking for people who are determined to make life better for people around the world.

Company Overview

Lilly, a leading innovation-driven corporation is developing a growing portfolio of pharmaceutical products by applying the latest research from its own worldwide laboratories and from collaborations with eminent scientific organizations.  Headquartered in Indianapolis, Indiana, Lilly makes life better – through medicines and information – for some of the world’s most urgent medical needs.  Founded over 145 years ago, the company has sustained a culture that values excellence, integrity and respect for people. This has resulted in Lilly frequently being ranked as one of the best companies in the world at which to work.  Lilly knows its business has prospered because of its employees – people with a talent for innovation and a passion for making a difference by finding treatments for the most stubborn diseases; people whose talent is matched by their generosity, and people with strong values and a determination to prevail, regardless of the challenges.  Join our team – and make a difference in improving health for people all over the world!

Manufacturing and Quality Technical Hub Hyderabad

Lilly has made a strategic investment of more than $1B dollars to establish a Manufacturing and Quality technical hub. This hub will oversee the significant investment in contract manufacturing of starting materials and intermediates for API manufacturing in India and the technical services responsible for managing the scientific agenda for manufacturing and quality. The hub will be recruiting top talent in the areas of process engineering, chemistry, analytical and data sciences to build a cutting-edge scientific organization supporting the exciting manufacturing portfolio of Lilly.

Job Description

Role Overview and Key Responsibilities:

Process Engineer provides technical leadership and hands‑on engineering support for the design, optimization, and scale‑up of laboratory‑based processes that enable robust manufacturing of drug substances and drug products. This role partners closely with development scientists, and cross‑functional engineering groups to deliver high‑quality technical solutions, reliable laboratory operations, and effective technology transfer. The successful candidate should have a proven track record of driving technical agendas and influence externally in the peptide and small molecule space.

Technical Development & Support

  • Partner with TS/MS scientists/analytical scientist in India, US and Ireland to design, develop, and refine laboratory‑scale processes.
  • Establish, maintain, and optimize unit operations used in the process development lab (e.g., chromatography, filtration, mixing, crystallization, upstream/downstream studies, formulation experiments, and others).
  • Develop scale‑down models that accurately represent full‑scale operations and use them to support process characterization, robustness studies, and troubleshooting.
  • Conduct hands‑on laboratory experimentation, data analysis, and technical reporting to support key development and manufacturing decisions.

Process Optimization & Technology Transfer

  • Support tech transfer activities by preparing process documentation, generating process parameters, and enabling smooth movement of processes from lab to pilot or manufacturing scale.
  • Support technical process issues and to implement long‑term improvements informed by lab experimentation.
  • Apply engineering fundamentals and first‑principles thinking to develop innovative solutions, improve process understanding, and enhance robustness.
  • Adhere to safe operation of laboratory equipment and ensure compliance with EH&S expectations.
  • Maintain high‑quality documentation practices, including experimental protocols, batch records, and engineering analyses.

Cross‑Functional Collaboration

  • Collaborate closely with automation, analytical, mechanical, and instrumentation engineering groups to introduce new tools, models, and technologies.
  • Partner with Quality, TS/MS, and manufacturing to align development activities with long‑term production needs.

Education and experience Requirement:

  • Ph.D. in scientific disciplines of Biochemistry, Chemistry, Chemical Engineering, or related fields, or equivalent industry experience Ph.D., Post Doc in Chemistry (Small molecule and Peptide chemistry) with 5-12 years’ experience.
  • Minimum 5 years of experience in process development, lab‑scale engineering, or manufacturing support in pharmaceutical, biotechnology, or similar industries.
  • Experience with process modeling software (e.g., Aspen, MATLAB, statistical design tools).
  • Working knowledge of GMP expectations and laboratory quality systems.
  • Demonstrated experience in technology transfer and scale‑up/scale‑down, in laboratory‑scale unit operations relevant to the role (e.g., chromatography, TFF, bioreactors, mixing systems, filtration and drying technologies).
  • Excellent written and verbal communication skills.
  • Strong problem‑solving abilities and abilities to work independently with minimal direction.

Other Information:

  • Some travel (domestic and international) less than 5% may be required.

Lilly is dedicated to helping individuals with disabilities to actively engage in the workforce, ensuring equal opportunities when vying for positions. If you require accommodation to submit a resume for a position at Lilly, please complete the accommodation request form (https://careers.lilly.com/us/en/workplace-accommodation) for further assistance. Please note this is for individuals to request an accommodation as part of the application process and any other correspondence will not receive a response.

Lilly does not discriminate on the basis of age, race, color, religion, gender, sexual orientation, gender identity, gender expression, national origin, protected veteran status, disability or any other legally protected status.

#WeAreLilly

Frequently Asked Questions

Is the salary disclosed for the Advisor/Sr. Advisor – Process Engineer-Peptides/Small molecule Scientist position at lilly?
The salary for this Advisor/Sr. Advisor – Process Engineer-Peptides/Small molecule Scientist role at lilly is not publicly listed. Click "Apply Now" to learn more about the compensation package on their official careers page.
Where is the Advisor/Sr. Advisor – Process Engineer-Peptides/Small molecule Scientist position at lilly located?
This Advisor/Sr. Advisor – Process Engineer-Peptides/Small molecule Scientist role at lilly is based in India, Hyderabad. The position is listed as on-site or hybrid. Check the full job description or apply directly to confirm the work arrangement.
Is the Advisor/Sr. Advisor – Process Engineer-Peptides/Small molecule Scientist role at lilly full-time or part-time?
This is listed as a Full time position. It is posted as a Advisor/Sr. Advisor – Process Engineer-Peptides/Small molecule Scientist role in the 540 Eli Lilly Services India Pvt Ltd – Hyderabad department at lilly.
Which team or department does the Advisor/Sr. Advisor – Process Engineer-Peptides/Small molecule Scientist at lilly belong to?
This Advisor/Sr. Advisor – Process Engineer-Peptides/Small molecule Scientist position is part of the 540 Eli Lilly Services India Pvt Ltd – Hyderabad department at lilly. See the full job description for more information about the team structure and responsibilities.
How do I apply for the Advisor/Sr. Advisor – Process Engineer-Peptides/Small molecule Scientist position at lilly?
Click the "Apply Now" button on this page. You will be redirected to lilly's official application portal hosted on workday where you can submit your application directly.
When was the Advisor/Sr. Advisor – Process Engineer-Peptides/Small molecule Scientist job at lilly posted?
This Advisor/Sr. Advisor – Process Engineer-Peptides/Small molecule Scientist position at lilly was posted on Jun 4, 2026. Apply as soon as possible — early applications are often reviewed first.
Advisor/Sr. Advisor – Process Engineer-Peptides/Small molecule Scientist
lilly
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